3-O-alpha-L-rhamnopyranosyl-(1→2)-[(4-sulfo)-beta-D-glucopyranosyl-(1→3)]-alpha-L-arabinopyranosyljujubogenin - Compound Card

3-O-alpha-L-rhamnopyranosyl-(1→2)-[(4-sulfo)-beta-D-glucopyranosyl-(1→3)]-alpha-L-arabinopyranosyljujubogenin

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3-O-alpha-L-rhamnopyranosyl-(1→2)-[(4-sulfo)-beta-D-glucopyranosyl-(1→3)]-alpha-L-arabinopyranosyljujubogenin

Structure
Zoomed Structure
  • Family: Plantae - Rhamnaceae
  • Kingdom: Plantae
  • Class: Saponin
    • Subclass: Dammarane Saponin
Canonical Smiles OC[C@H]1O[C@@H](O[C@H]2[C@@H](O)CO[C@H]([C@@H]2O[C@@H]2O[C@@H](C)[C@@H]([C@H]([C@H]2O)O)O)O[C@H]2CC[C@]3([C@H](C2(C)C)CC[C@@]2([C@@H]3CC[C@H]3[C@@]42CO[C@]2(C4)[C@@H]3[C@@](C)(O)C[C@@H](O2)C=C(C)C)C)C)[C@@H]([C@H]([C@@H]1OS(=O)(=O)O)O)O
InChI InChI=1S/C47H76O20S/c1-21(2)15-23-16-45(8,55)38-24-9-10-28-43(6)13-12-29(42(4,5)27(43)11-14-44(28,7)46(24)19-47(38,66-23)60-20-46)63-41-37(65-39-33(53)31(51)30(50)22(3)61-39)35(25(49)18-59-41)64-40-34(54)32(52)36(26(17-48)62-40)67-68(56,57)58/h15,22-41,48-55H,9-14,16-20H2,1-8H3,(H,56,57,58)/t22-,23-,24+,25-,26+,27-,28+,29-,30-,31+,32+,33+,34+,35-,36+,37+,38-,39-,40-,41-,43-,44+,45-,46-,47-/m0/s1
InChIKey GESNVBQCZNXLIQ-YTAUNOPHSA-N
Formula C47H76O20S
HBA 19
HBD 9
MW 993.17
Rotatable Bonds 10
TPSA 299.28
LogP 0.82
Number Rings 9
Number Aromatic Rings 0
Heavy Atom Count 68
Formal Charge 0
Fraction CSP3 0.96
Exact Mass 992.47
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Ziziphus lotus Rhamnaceae Plantae 345809

Showing of synonyms

  • Maciuk A, Lavaud C, et al. (2004). Four New Dammarane Saponin from Zizyphus lotus. Journal of natural products, 2004, 67(10), 1639-43. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: C1CCOC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC7OCCC(OC8CCCCO8)C7OC9CCCCO9

Level: 3

Mol. Weight: 993.17 g/mol

Structure

SMILES: C1CCOC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC(OCCC7)C7OC8CCCCO8

Level: 2

Mol. Weight: 993.17 g/mol

Structure

SMILES: C1CCOC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC(OCC7)CC7OC8CCCCO8

Level: 2

Mol. Weight: 993.17 g/mol

Structure

SMILES: O1CCCCC1OC2C(COCC2)OC3CCCCO3

Level: 2

Mol. Weight: 993.17 g/mol

Structure

SMILES: C1CCOC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC7CCCCO7

Level: 1

Mol. Weight: 993.17 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 993.17 g/mol

Structure

SMILES: C1COCCC1OC2CCCCO2

Level: 1

Mol. Weight: 993.17 g/mol

Structure

SMILES: C1CCOC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCCC6

Level: 0

Mol. Weight: 993.17 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 993.17 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.08
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
8471.070
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
1107992.14

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.980
Plasma Protein Binding
92.74
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
-0.330
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Toxic
Bioconcentration Factor
-25764.410
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-1.110
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
4.050
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2010954331.390
Rat (Acute)
2.680
Rat (Chronic Oral)
6.030
Fathead Minnow
2538406.340
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
226172303.820
Hydration Free Energy
-2.920
Log(D) at pH=7.4
-104.730
Log(P)
0.73
Log S
-1.73
Log(Vapor Pressure)
-7447601.37
Melting Point
208.9
pKa Acid
-54187.04
pKa Basic
-406.37
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7926
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7462

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