3-O-alpha-L-rhamnopyranosyl-(1→2)-[(4-sulfo)-beta-D-glucopyranosyl-(1→3)]-beta-D-galactopyranosyl-(20R,22R)-16β,22:16alpha,30-diepoxydammar-24-ene-3beta,20-diol - Compound Card

3-O-alpha-L-rhamnopyranosyl-(1→2)-[(4-sulfo)-beta-D-glucopyranosyl-(1→3)]-beta-D-galactopyranosyl-(20R,22R)-16β,22:16alpha,30-diepoxydammar-24-ene-3beta,20-diol

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3-O-alpha-L-rhamnopyranosyl-(1→2)-[(4-sulfo)-beta-D-glucopyranosyl-(1→3)]-beta-D-galactopyranosyl-(20R,22R)-16β,22:16alpha,30-diepoxydammar-24-ene-3beta,20-diol

Structure
Zoomed Structure
  • Family: Plantae - Rhamnaceae
  • Kingdom: Plantae
  • Class: Saponin
    • Subclass: Dammarane Saponin
Canonical Smiles OCC1OC(O[C@H]2CC[C@]3([C@H](C2(C)C)CC[C@@]2([C@@H]3CC[C@H]3[C@@]42CO[C@]2(C4)[C@@H]3[C@@](C)(O)[C@H](O2)CC=C(C)C)C)C)C(C(C1O)OC1OC(CO)C(C(C1O)O)OS(=O)(=O)O)OC1OC(C)C(C(C1O)O)O
InChI InChI=1S/C48H78O21S/c1-21(2)9-12-29-46(8,57)39-23-10-11-27-44(6)15-14-28(43(4,5)26(44)13-16-45(27,7)47(23)19-48(39,68-29)61-20-47)65-42-38(67-40-34(55)32(53)30(51)22(3)62-40)37(31(52)24(17-49)63-42)66-41-35(56)33(54)36(25(18-50)64-41)69-70(58,59)60/h9,22-42,49-57H,10-20H2,1-8H3,(H,58,59,60)/t22?,23-,24?,25?,26+,27-,28+,29-,30?,31?,32?,33?,34?,35?,36?,37?,38?,39+,40?,41?,42?,44+,45-,46+,47+,48+/m1/s1
InChIKey XHOKVHJYEFYPAQ-LGDOCONKSA-N
Formula C48H78O21S
HBA 20
HBD 10
MW 1023.2
Rotatable Bonds 12
TPSA 319.51
LogP 0.18
Number Rings 9
Number Aromatic Rings 0
Heavy Atom Count 70
Formal Charge 0
Fraction CSP3 0.96
Exact Mass 1022.48
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Ziziphus lotus Rhamnaceae Plantae 345809

Showing of synonyms

  • Maciuk A, Lavaud C, et al. (2004). Four New Dammarane Saponin from Zizyphus lotus. Journal of natural products, 2004, 67(10), 1639-43. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: C1COC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC7OCCC(OC8CCCCO8)C7OC9CCCCO9

Level: 3

Mol. Weight: 1023.2 g/mol

Structure

SMILES: C1COC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC(OCCC7)C7OC8CCCCO8

Level: 2

Mol. Weight: 1023.2 g/mol

Structure

SMILES: C1COC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC(OCC7)CC7OC8CCCCO8

Level: 2

Mol. Weight: 1023.2 g/mol

Structure

SMILES: O1CCCCC1OC2C(COCC2)OC3CCCCO3

Level: 2

Mol. Weight: 1023.2 g/mol

Structure

SMILES: C1COC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC7CCCCO7

Level: 1

Mol. Weight: 1023.2 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 1023.2 g/mol

Structure

SMILES: C1COCCC1OC2CCCCO2

Level: 1

Mol. Weight: 1023.2 g/mol

Structure

SMILES: C1COC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCCC6

Level: 0

Mol. Weight: 1023.2 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 1023.2 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.1
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
23458.7
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
3066725.13

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.99
Plasma Protein Binding
65.15
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
-0.04
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-71320.3
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.92
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
4.05
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-5565960978.53
Rat (Acute)
2.68
Rat (Chronic Oral)
12.68
Fathead Minnow
7025844.92
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
626011777.06
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-331.56
Log(P)
0.52
Log S
-1.6
Log(Vapor Pressure)
-20614133.27
Melting Point
208.63
pKa Acid
-150124.23
pKa Basic
-1184.66
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.8146

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