3,6-di-O-caffeoyl-(alpha/beta)-glucose - Compound Card

3,6-di-O-caffeoyl-(alpha/beta)-glucose

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3,6-di-O-caffeoyl-(alpha/beta)-glucose

Structure
Zoomed Structure
  • Family: Plantae - Rosaceae
  • Kingdom: Plantae
  • Class: Phenolic
    • Subclass: Caffeoyl Ester
Canonical Smiles O=C(OCC1OC(O)[C@H](C([C@@H]1O)OC(=O)/C=C/c1ccc(c(c1)O)O)O)CCc1ccc(c(c1)O)O
InChI InChI=1S/C24H26O12/c25-14-5-1-12(9-16(14)27)3-7-19(29)34-11-18-21(31)23(22(32)24(33)35-18)36-20(30)8-4-13-2-6-15(26)17(28)10-13/h1-2,4-6,8-10,18,21-28,31-33H,3,7,11H2/b8-4+/t18?,21-,22+,23?,24?/m1/s1
InChIKey ZJNXCKPIUZHIBZ-KBAGINIPSA-N
Formula C24H26O12
HBA 12
HBD 7
MW 506.46
Rotatable Bonds 8
TPSA 203.44
LogP 0.05
Number Rings 3
Number Aromatic Rings 2
Heavy Atom Count 36
Formal Charge 0
Fraction CSP3 0.33
Exact Mass 506.14
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Rubus sanctus Rosaceae Plantae 75089

Showing of synonyms

  • Hussein S.A, Ayoub N.A, et al. (2003). Caffeoyl sugar esters and an ellagitannin from Rubus sanctus. Phytochemistry, 2003, 63(8), 905-11. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: c1ccccc1C=CC(=O)OC(CCO2)CC2COC(=O)CCc3ccccc3

Level: 2

Mol. Weight: 506.46 g/mol

Structure

SMILES: O1CCCCC1COC(=O)CCc2ccccc2

Level: 1

Mol. Weight: 506.46 g/mol

Structure

SMILES: C1COCCC1OC(=O)C=Cc2ccccc2

Level: 1

Mol. Weight: 506.46 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 506.46 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 506.46 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-7.16
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-5.08
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-1.33

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.82
Plasma Protein Binding
37.24
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
15.29
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Safe
Bioconcentration Factor
-2.34
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.94
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.56
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-355.19
Rat (Acute)
2.13
Rat (Chronic Oral)
3.78
Fathead Minnow
4.39
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
605.58
Hydration Free Energy
-3.3
Log(D) at pH=7.4
0.97
Log(P)
0.4
Log S
-3.29
Log(Vapor Pressure)
-12.11
Melting Point
187.28
pKa Acid
6.35
pKa Basic
5.23
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.9354
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.9075
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.9037
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 4 0.9027
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.8817
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8743
Dihydrofolate reductase P00378 DYR_CHICK Gallus gallus 3 0.8689
NAD(P)H-hydrate epimerase Q8K4Z3 NNRE_MOUSE Mus musculus 3 0.8679
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8502
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8440
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8345
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8288
Aminoglycoside N(3)-acetyltransferase A0A3P1UCA6 Q81P86_BACAN Bacillus anthracis 3 0.8264
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 3 0.8145
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8123
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8118
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.8075
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.8045
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.8014
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8004
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.7962
Thymidine phosphorylase Q7CP66 TYPH_SALTY Salmonella typhimurium 3 0.7900
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7888
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7873
Avidin P02701 AVID_CHICK Gallus gallus 3 0.7818
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 3 0.7774
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 3 0.7760
Caffeic acid O-methyltransferase Q9ZTU2 Q9ZTU2_LOLPR Lolium perenne 4 0.7757
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7707
Cytochrome P450 Q93H81 Q93H81_STRAX Streptomyces avermitilis 3 0.7688
Xylose isomerase P24300 XYLA_STRRU Streptomyces rubiginosus 3 0.7674
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7670
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7637
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7629
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7584
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.7583
Ribosomal RNA small subunit methyltransferase NEP1 Q06287 NEP1_YEAST Saccharomyces cerevisiae 4 0.7579
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta P78356 PI42B_HUMAN Homo sapiens 3 0.7530
Tyrosine-protein kinase JAK3 P52333 JAK3_HUMAN Homo sapiens 3 0.7510
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7505
Tyrosine-protein kinase JAK1 P23458 JAK1_HUMAN Homo sapiens 3 0.7504
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7499
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7466
Threonine--tRNA ligase P0A8M3 SYT_ECOLI Escherichia coli 3 0.7414
Eukaryotic translation initiation factor 4E-1 P29557 IF4E1_WHEAT Triticum aestivum 4 0.7376
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.7353
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7309
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7302
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7297
APH(2'')-Id O68183 O68183_ENTCA Enterococcus casseliflavus 3 0.7278
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7277
Tyrosine-protein kinase JAK1 P23458 JAK1_HUMAN Homo sapiens 3 0.7268
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 3 0.7239
Eukaryotic translation initiation factor 4E type 3 Q9DBB5 IF4E3_MOUSE Mus musculus 3 0.7231
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7210
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7198
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7187
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7186
Histone-lysine N-methyltransferase EHMT1 Q9H9B1 EHMT1_HUMAN Homo sapiens 3 0.7179
Serine/threonine-protein kinase SKY1 Q03656 SKY1_YEAST Saccharomyces cerevisiae 2 0.7177
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 2 0.7168
ATP-dependent protease subunit HslV P0A7B8 HSLV_ECOLI Escherichia coli 3 0.7155
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7155
Deoxycytidine kinase P27707 DCK_HUMAN Homo sapiens 3 0.7154
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 3 0.7149
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7148
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 2 0.7148
Uncharacterized protein YML079W Q03629 YMH9_YEAST Saccharomyces cerevisiae 2 0.7120
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 3 0.7118
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7106
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7103
Ethylene receptor 1 P49333 ETR1_ARATH Arabidopsis thaliana 3 0.7096
Dihydropteroate synthase Q81VW8 Q81VW8_BACAN Bacillus anthracis 2 0.7081
Histone-lysine N-methyltransferase EHMT1 Q9H9B1 EHMT1_HUMAN Homo sapiens 3 0.7075
Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 Q8GZB6 SUVH4_ARATH Arabidopsis thaliana 3 0.7075
Cyclic GMP-AMP phosphodiesterase SMPDL3A Q92484 ASM3A_HUMAN Homo sapiens 2 0.7067
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 2 0.7066
Histone-lysine N-methyltransferase EHMT2 Q96KQ7 EHMT2_HUMAN Homo sapiens 3 0.7065
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7064
Deoxycytidine kinase P27707 DCK_HUMAN Homo sapiens 3 0.7059
Elongation factor Tu 1 P0CE47 EFTU1_ECOLI Escherichia coli 3 0.7052
Histone-lysine N-methyltransferase EHMT1 Q9H9B1 EHMT1_HUMAN Homo sapiens 3 0.7049
Protocatechuate 3,4-dioxygenase beta chain P00437 PCXB_PSEPU Pseudomonas putida 2 0.7048
Serine/threonine-protein kinase Chk2 O96017 CHK2_HUMAN Homo sapiens 2 0.7046
Anthranilate phosphoribosyltransferase P00500 TRPD_ACIAD Acinetobacter baylyi 2 0.7038
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7037
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7036
Tryptophan--tRNA ligase Q9PIB4 SYW_CAMJE Campylobacter jejuni subsp. jejuni serotype O:2 4 0.7028
DNA polymerase theta O75417 DPOLQ_HUMAN Homo sapiens 4 0.7018
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 2 0.7017

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