7S,8R,8′R-(−)-5-methoxylariciresinol-4,4′-bis-O-beta-d-glucopyranoside - Compound Card

7S,8R,8′R-(−)-5-methoxylariciresinol-4,4′-bis-O-beta-d-glucopyranoside

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7S,8R,8′R-(−)-5-methoxylariciresinol-4,4′-bis-O-beta-d-glucopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Rubiaceae
  • Kingdom: Plantae
  • Class: Lignan
    • Subclass: Lignan Bis-Glucoside
Canonical Smiles OCC1O[C@H](Oc2ccc(cc2OC)C[C@H]2CO[C@@H]([C@H]2CO)c2cc(OC)c(c(c2)OC)O[C@@H]2OC(CO)[C@H](C([C@@H]2O)O)O)[C@@H](C([C@H]1O)O)O
InChI InChI=1S/C33H46O17/c1-43-19-7-14(4-5-18(19)47-32-28(41)26(39)24(37)22(11-35)48-32)6-16-13-46-30(17(16)10-34)15-8-20(44-2)31(21(9-15)45-3)50-33-29(42)27(40)25(38)23(12-36)49-33/h4-5,7-9,16-17,22-30,32-42H,6,10-13H2,1-3H3/t16-,17-,22?,23?,24-,25+,26?,27?,28+,29-,30+,32-,33-/m0/s1
InChIKey FMRHEQINXVLPNS-VGHWAIBISA-N
Formula C33H46O17
HBA 17
HBD 9
MW 714.71
Rotatable Bonds 13
TPSA 255.91
LogP -2.39
Number Rings 5
Number Aromatic Rings 2
Heavy Atom Count 50
Formal Charge 0
Fraction CSP3 0.64
Exact Mass 714.27
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Galium sinaicum Rubiaceae Plantae 25168

Showing of synonyms

  • El Gamal A.A, Takeya K, et al. (1997). Lignan bis-glucosides from Galium sinaicum. Phytochemistry, 1997, 45(3), 597-600. [View]

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1Oc(cc2)ccc2CC3CC(OC3)c4ccc(cc4)OC5CCCCO5

Level: 4

Mol. Weight: 714.71 g/mol

Structure

SMILES: c1ccccc1CC2CC(OC2)c3ccc(cc3)OC4CCCCO4

Level: 3

Mol. Weight: 714.71 g/mol

Structure

SMILES: c1ccccc1C(OC2)CC2Cc3ccc(cc3)OC4CCCCO4

Level: 3

Mol. Weight: 714.71 g/mol

Structure

SMILES: C1OCCC1Cc2ccc(cc2)OC3CCCCO3

Level: 2

Mol. Weight: 714.71 g/mol

Structure

SMILES: O1CCCC1c2ccc(cc2)OC3CCCCO3

Level: 2

Mol. Weight: 714.71 g/mol

Structure

SMILES: c1ccccc1CC2CC(OC2)c3ccccc3

Level: 2

Mol. Weight: 714.71 g/mol

Structure

SMILES: c1ccccc1OC2CCCCO2

Level: 1

Mol. Weight: 714.71 g/mol

Structure

SMILES: C1OCCC1Cc2ccccc2

Level: 1

Mol. Weight: 714.71 g/mol

Structure

SMILES: O1CCCC1c2ccccc2

Level: 1

Mol. Weight: 714.71 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 714.71 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 714.71 g/mol

Structure

SMILES: C1CCOC1

Level: 0

Mol. Weight: 714.71 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.5
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-3.13
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
338.79

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.88
Plasma Protein Binding
66.64
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
4.29
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-4.36
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.47
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
4.81
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-614586.37
Rat (Acute)
2.85
Rat (Chronic Oral)
5.12
Fathead Minnow
786.17
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
63735.66
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-0.28
Log(P)
-2.3
Log S
-3.24
Log(Vapor Pressure)
-2063.91
Melting Point
226.02
pKa Acid
1.49
pKa Basic
2.5
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8391
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.8275
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.8257
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 3 0.8257
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.8249
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.8203
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.8126
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 3 0.7836
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.7703
Beta-galactosidase P00722 BGAL_ECOLI Escherichia coli 4 0.7696
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 4 0.7567
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.7462
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7449
Purine nucleoside phosphorylase DeoD-type Q5EEL8 DEOD_BACCE Bacillus cereus 3 0.7395
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.7370
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.7355
Genome polyprotein Q2YHF0 POLG_DEN4T Dengue virus type 4 3 0.7342
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 3 0.7268
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7213
Purine nucleoside phosphorylase Q8I3X4 Q8I3X4_PLAF7 Plasmodium falciparum 3 0.7158
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.7157
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7142
Acetylglutamate kinase Q0ASS9 Q0ASS9_MARMM Maricaulis maris 3 0.7077
Flavin-dependent thymidylate synthase Q9WYT0 THYX_THEMA Thermotoga maritima 3 0.7061
cGMP-dependent protein kinase 2 Q13237 KGP2_HUMAN Homo sapiens 3 0.7039

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