2-[(benzoyloxy)methyl]-phenyl-O-beta-xylosyl-(1→2)-beta-glucopyranoside - Compound Card

2-[(benzoyloxy)methyl]-phenyl-O-beta-xylosyl-(1→2)-beta-glucopyranoside

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2-[(benzoyloxy)methyl]-phenyl-O-beta-xylosyl-(1→2)-beta-glucopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Salicaceae
  • Kingdom: Plantae
  • Class: Phenolic
Canonical Smiles OC[C@H]1O[C@@H](Oc2ccccc2COC(c2ccccc2)O)[C@@H]([C@H]([C@@H]1O)O)O[C@H]1O[C@H]([C@H]([C@@H]1O)O)CO
InChI InChI=1S/C25H32O12/c26-10-16-18(28)20(30)22(37-24-21(31)19(29)17(11-27)35-24)25(36-16)34-15-9-5-4-8-14(15)12-33-23(32)13-6-2-1-3-7-13/h1-9,16-32H,10-12H2/t16-,17+,18-,19-,20+,21+,22-,23?,24-,25-/m1/s1
InChIKey XHFJXKRKLPHGJT-UZMYVMKKSA-N
Formula C25H32O12
HBA 12
HBD 7
MW 524.52
Rotatable Bonds 10
TPSA 187.76
LogP -1.46
Number Rings 4
Number Aromatic Rings 2
Heavy Atom Count 37
Formal Charge 0
Fraction CSP3 0.52
Exact Mass 524.19
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Flacourtia rukam Salicaceae Plantae 1085434

Showing of synonyms

  • Afifi N.I, Moawad A.S, et al. (2022). Four new phenolics and antiparasitic secondary metabolites from Flacourtia rukam Zoll. & Mortizi. Natural product research, 2022, 36(14), 3626-3637. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: c1ccccc1COCc2c(cccc2)OC(OCCC3)C3OC4CCCO4

Level: 3

Mol. Weight: 524.52 g/mol

Structure

SMILES: c1ccccc1COCc2c(cccc2)OC3CCCCO3

Level: 2

Mol. Weight: 524.52 g/mol

Structure

SMILES: O1CCCC1OC2C(OCCC2)Oc3ccccc3

Level: 2

Mol. Weight: 524.52 g/mol

Structure

SMILES: c1ccccc1COCc2ccccc2

Level: 1

Mol. Weight: 524.52 g/mol

Structure

SMILES: c1ccccc1OC2CCCCO2

Level: 1

Mol. Weight: 524.52 g/mol

Structure

SMILES: O1CCCC1OC2CCCOC2

Level: 1

Mol. Weight: 524.52 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 524.52 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 524.52 g/mol

Structure

SMILES: C1CCOC1

Level: 0

Mol. Weight: 524.52 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.41
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-4.840
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-0.86

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.980
Plasma Protein Binding
78.8
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
6.850
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-2.860
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.700
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.830
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-1239.370
Rat (Acute)
2.760
Rat (Chronic Oral)
3.910
Fathead Minnow
3.760
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
511.280
Hydration Free Energy
-3.060
Log(D) at pH=7.4
0.630
Log(P)
-1.07
Log S
-2.62
Log(Vapor Pressure)
-12.87
Melting Point
160.38
pKa Acid
5.24
pKa Basic
2.38
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.9461
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.9395
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 3 0.9062
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 3 0.9026
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8961
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 3 0.8657
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8573
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8369
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.8315
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.8272
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 3 0.8205
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8130
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8103
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.7914
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 3 0.7886
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 3 0.7882
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.7760
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7747
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha P49354 FNTA_HUMAN Homo sapiens 3 0.7745
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7691
L-lactate dehydrogenase A chain P13491 LDHA_RABIT Oryctolagus cuniculus 2 0.7597
Thermolysin P00800 THER_BACTH Bacillus thermoproteolyticus 3 0.7578
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7560
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7540
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 2 0.7526
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.7511
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.7476
DNA-directed DNA polymerase Q38087 DPOL_BPR69 Escherichia phage RB69 3 0.7475
NAD(P)H dehydrogenase [quinone] 1 P15559 NQO1_HUMAN Homo sapiens 3 0.7458
Cathepsin S P25774 CATS_HUMAN Homo sapiens 2 0.7451
L-lactate dehydrogenase A chain P04642 LDHA_RAT Rattus norvegicus 3 0.7445
Mitogen-activated protein kinase 1 P63086 MK01_RAT Rattus norvegicus 3 0.7377
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 3 0.7358
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7276
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7258
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7251
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 2 0.7218
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.7202
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7171
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7157
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7139
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7121
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 O50008 METE1_ARATH Arabidopsis thaliana 2 0.7077
ABC-type polar amino acid transport system, ATPase component Q8RCC2 Q8RCC2_CALS4 Caldanaerobacter subterraneus subsp. tengcongensis 2 0.7061
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 3 0.7057
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 3 0.7042
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7021

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