Harpulliaside B - Compound Card

Harpulliaside B

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Harpulliaside B

Structure
Zoomed Structure
  • Family: Plantae - Sapindaceae
  • Kingdom: Plantae
  • Class: Benzenoid
    • Subclass: Benzeneacetic Derivative
Canonical Smiles OCC1O[C@@H](Oc2c(cc(cc2CC=C(C)C)C(C(=O)OC)O)C[C@@H](C(=C)C)CC=C(C)C)C([C@H]([C@@H]1O)O)O
InChI InChI=1S/C30H44O9/c1-16(2)8-10-19(18(5)6)12-22-14-21(24(32)29(36)37-7)13-20(11-9-17(3)4)28(22)39-30-27(35)26(34)25(33)23(15-31)38-30/h8-9,13-14,19,23-27,30-35H,5,10-12,15H2,1-4,6-7H3/t19-,23?,24?,25+,26-,27?,30-/m0/s1
InChIKey HMSAXBZGIYLISX-PAARDMBGSA-N
Formula C30H44O9
HBA 9
HBD 5
MW 548.67
Rotatable Bonds 12
TPSA 145.91
LogP 2.67
Number Rings 2
Number Aromatic Rings 1
Heavy Atom Count 39
Formal Charge 0
Fraction CSP3 0.57
Exact Mass 548.3
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Harpullia pendula Sapindaceae Plantae 884417

Showing of synonyms

  • Abdelkader M, Rateb M, et al. (2016). Harpulliasides A and B: Two new benzeneacetic acid derivatives from Harpullia pendula. Phytochemistry Letters, 2016, 15, 131-135. [View]

No compound-protein relationship available.

Structure

SMILES: c1ccccc1OC2CCCCO2

Level: 1

Mol. Weight: 548.67 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 548.67 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 548.67 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.53
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.95
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-1.45

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.16
Plasma Protein Binding
78.54
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
1.68
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.35
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.54
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.29
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-894.62
Rat (Acute)
2.81
Rat (Chronic Oral)
3.76
Fathead Minnow
5.82
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
493.3
Hydration Free Energy
-2.99
Log(D) at pH=7.4
2.97
Log(P)
4.23
Log S
-3.53
Log(Vapor Pressure)
-10.56
Melting Point
136.48
pKa Acid
6.61
pKa Basic
5.39
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.8044
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7909
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7668
S-adenosylmethionine decarboxylase proenzyme P17707 DCAM_HUMAN Homo sapiens 3 0.7609
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 2 0.7560
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7498
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.7487
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7478
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.7474
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.7463
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7441
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7363
Methyl-branched lipid omega-hydroxylase P9WPP3 CP124_MYCTU Mycobacterium tuberculosis 3 0.7349
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 2 0.7258
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7215
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.7136
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7097
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7054

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