Atropine - Compound Card

Atropine

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Atropine

Structure
Zoomed Structure
  • Family: Plantae - Solanaceae
  • Kingdom: Plantae
  • Class: Alkaloid
    • Subclass: Tropane Alkaloid
Canonical Smiles OCC(c1ccccc1)C(=O)OC1CC2CCC(C1)N2C
InChI InChI=1S/C17H23NO3/c1-18-13-7-8-14(18)10-15(9-13)21-17(20)16(11-19)12-5-3-2-4-6-12/h2-6,13-16,19H,7-11H2,1H3
InChIKey RKUNBYITZUJHSG-UHFFFAOYSA-N
Formula C17H23NO3
HBA 4
HBD 1
MW 289.38
Rotatable Bonds 4
TPSA 49.77
LogP 1.93
Number Rings 3
Number Aromatic Rings 1
Heavy Atom Count 21
Formal Charge 0
Fraction CSP3 0.59
Exact Mass 289.17
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Hyoscyamus muticus Solanaceae Plantae 35626

Showing of synonyms

  • Djilani A, Legseir B. (2005). Extraction of atropine by ultrasounds in different solvent systems. Fitoterapia, 2005, 76(2), 148-52. [View] [PubMed]
Pubchem: 3661
Chebi: 104243
Nmrshiftdb2: 10008977
Metabolights: MTBLC104243
Chembl: CHEMBL9751
Bindingdb: 86231
CPRiL: 579
Structure

SMILES: c1ccccc1CC(=O)OC(C2)CC(N3)CCC23

Level: 1

Mol. Weight: 289.38 g/mol

Structure

SMILES: C12CCC(N2)CCC1

Level: 0

Mol. Weight: 289.38 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 289.38 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.02
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.48
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.67

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.27
Plasma Protein Binding
24.48
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.2
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.07
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-2.98
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.42
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
3.46
Rat (Acute)
2.83
Rat (Chronic Oral)
2.05
Fathead Minnow
3.98
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
351.1
Hydration Free Energy
-9.35
Log(D) at pH=7.4
0.87
Log(P)
1.83
Log S
-1.8
Log(Vapor Pressure)
-6.46
Melting Point
113.72
pKa Acid
9.5
pKa Basic
9.35
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.9477
Thermolysin P00800 THER_BACTH Bacillus thermoproteolyticus 3 0.9126
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.9049
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8962
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8877
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8769
Proton-gated ion channel Q7NDN8 GLIC_GLOVI Gloeobacter violaceus 3 0.8713
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8688
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.8351
Biflaviolin synthase CYP158A2 Q9FCA6 C1582_STRCO Streptomyces coelicolor / M145) 3 0.8324
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.8246
RNA-dependent RNA polymerase Q6A562 Q6A562_9VIRU Thosea asigna virus 3 0.8236
Polyamine oxidase FMS1 P50264 FMS1_YEAST Saccharomyces cerevisiae 3 0.8167
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 3 0.8161
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.8135
Gag-Pol polyprotein P0C6F2 POL_HV1LW Human immunodeficiency virus type 1 group M subtype B 3 0.8095
Purine nucleoside phosphorylase DeoD-type B1JL34 DEOD_YERPY Yersinia pseudotuberculosis serotype O:3 3 0.8050
Lethal factor P15917 LEF_BACAN Bacillus anthracis 3 0.8049
Indole-3-glycerol phosphate synthase P9WFX7 TRPC_MYCTU Mycobacterium tuberculosis 3 0.7999
Biflaviolin synthase CYP158A2 Q9FCA6 C1582_STRCO Streptomyces coelicolor / M145) 3 0.7990
4-alpha-glucanotransferase O87172 MALQ_THETH Thermus thermophilus 3 0.7936
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7760
Chloramphenicol 3-O phosphotransferase Q56148 CPT_STRVP Streptomyces venezuelae 3 0.7620
Chymotrypsinogen A P00766 CTRA_BOVIN Bos taurus 3 0.7579
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7535
Flavin reductase like domain-containing protein Q4UKE8 Q4UKE8_RICFE Rickettsia felis 3 0.7481
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 2 0.7457
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 3 0.7437
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase O33877 FABA_PSEAE Pseudomonas aeruginosa 3 0.7419
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7393
Metallo-beta-lactamase type 2 C7C422 BLAN1_KLEPN Klebsiella pneumoniae 2 0.7381
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7358
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7345
Class 10 plant pathogenesis-related protein 2B Q9LLQ2 P102B_LUPLU Lupinus luteus 3 0.7334
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7329
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7325
4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1b, chloroplastic Q1XH05 HGL1B_WHEAT Triticum aestivum 3 0.7325
cGMP-dependent protein kinase 2 Q13237 KGP2_HUMAN Homo sapiens 2 0.7325
Agglutinin alpha chain P18674 LECA_MACPO Maclura pomifera 3 0.7307
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 3 0.7307
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7306
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 2 0.7296
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 2 0.7295
4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic P49235 HGGL1_MAIZE Zea mays 2 0.7293
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7287
Gag-Pol polyprotein P03369 POL_HV1A2 Human immunodeficiency virus type 1 group M subtype B 2 0.7263
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7240
Chloramphenicol 3-O phosphotransferase Q56148 CPT_STRVP Streptomyces venezuelae 3 0.7238
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 2 0.7234
Transcriptional activator, LuxR/UhpA family of regulators Q7NQP7 Q7NQP7_CHRVO Chromobacterium violaceum 3 0.7229
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.7219
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.7212
Regulatory protein SdiA P07026 SDIA_ECOLI Escherichia coli 3 0.7207
Nitric oxide synthase 1 P29476 NOS1_RAT Rattus norvegicus 2 0.7191
Archaeal actin homolog Q9HKL4 ACTH_THEAC Thermoplasma acidophilum 2 0.7190
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7184
Dihydrofolate reductase P00378 DYR_CHICK Gallus gallus 2 0.7177
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 4 0.7173
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7172
Glycoside Hydrolase Family 13 Q65MI2 Q65MI2_BACLD Bacillus licheniformis 2 0.7151
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.7146
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.7141
Karilysin D0EM77 KLY_TANFA Tannerella forsythia 3 0.7135
Prothrombin P00734 THRB_HUMAN Homo sapiens 2 0.7115
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 2 0.7102
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 2 0.7079
Endoglycoceramidase II O33853 O33853_RHOSO Rhodococcus sp 3 0.7072
Type II methyltransferase M1.MboII P23192 MTM2_MORBO Moraxella bovis 3 0.7068
Cathepsin S P25774 CATS_HUMAN Homo sapiens 2 0.7053
cAMP-dependent protein kinase catalytic subunit alpha P05132 KAPCA_MOUSE Mus musculus 3 0.7046
cAMP-dependent protein kinase type I-alpha regulatory subunit P00514 KAP0_BOVIN Bos taurus 2 0.7035
Thermolysin P00800 THER_BACTH Bacillus thermoproteolyticus 3 0.7021
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7019
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7017
Alanine racemase Q180W0 Q180W0_CLOD6 Clostridioides difficile 2 0.7009

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