Daucovirgolide I - Compound Card

Daucovirgolide I

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Daucovirgolide I

Structure
Zoomed Structure
  • Family: Plantae - Umbelliferae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Sesquiterpene
Canonical Smiles C/C=C(\C(=O)O[C@]1(C)C(=O)O[C@@H]2[C@@H]1[C@@H](OC(=O)[C@@]1(C)O[C@H]1C)[C@@H]1O[C@@]1(C)CC[C@H]1[C@@](C2)(C)O1)/C
InChI InChI=1S/C25H34O9/c1-8-12(2)19(26)34-25(7)16-14(29-21(25)28)11-23(5)15(32-23)9-10-22(4)18(33-22)17(16)30-20(27)24(6)13(3)31-24/h8,13-18H,9-11H2,1-7H3/b12-8-/t13-,14-,15-,16+,17+,18-,22-,23-,24-,25-/m0/s1
InChIKey GFOBMEXYGHCVKR-POJGTETMSA-N
Formula C25H34O9
HBA 9
HBD 0
MW 478.54
Rotatable Bonds 4
TPSA 116.49
LogP 2.38
Number Rings 5
Number Aromatic Rings 0
Heavy Atom Count 34
Formal Charge 0
Fraction CSP3 0.8
Exact Mass 478.22
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Daucus virgatus Umbelliferae Plantae 1869349

Showing of synonyms

  • Sirignano C, Snene A, et al. (2019). Daucovirgolides I-L, four congeners of the antimalarial daucovirgolide G from Daucus virgatus. Fitoterapia,2019,137,104188. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CC1C(=O)OC2C(CC(=O)O3)C3CC(O4)C4CCC(O5)C25

Level: 1

Mol. Weight: 478.54 g/mol

Structure

SMILES: C12C(O2)CCC3C(O3)CC4C(C1)CC(=O)O4

Level: 0

Mol. Weight: 478.54 g/mol

Structure

SMILES: C1CO1

Level: 0

Mol. Weight: 478.54 g/mol

Antimalarial

Absorption

Caco-2 (logPapp)
-4.93
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.72
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-3.19

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.34
Plasma Protein Binding
37.38
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.92
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.01
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.37
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
6.1
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-252.71
Rat (Acute)
5.01
Rat (Chronic Oral)
1.34
Fathead Minnow
3.96
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Toxic
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
412.69
Hydration Free Energy
-2.85
Log(D) at pH=7.4
1.9
Log(P)
2.75
Log S
-3.98
Log(Vapor Pressure)
-7.07
Melting Point
66.43
pKa Acid
4.81
pKa Basic
-0.59
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 3 0.8062
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7127

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