Daucovirgolide J - Compound Card

Daucovirgolide J

Select a section from the left sidebar

Daucovirgolide J

Structure
Zoomed Structure
  • Family: Plantae - Umbelliferae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Sesquiterpene
Canonical Smiles C/C=C(\C(=O)O[C@]1(C)C(=O)O[C@@H]2[C@@H]1[C@@H](OC(=O)[C@@]1(C)O[C@H]1C)[C@@H]1O[C@@]1(C)CC[C@@H](C(=C)C2)OO)/C
InChI InChI=1S/C25H34O10/c1-8-12(2)20(26)34-25(7)17-16(30-22(25)28)11-13(3)15(35-29)9-10-23(5)19(33-23)18(17)31-21(27)24(6)14(4)32-24/h8,14-19,29H,3,9-11H2,1-2,4-7H3/b12-8-/t14-,15-,16-,17+,18+,19-,23-,24-,25-/m0/s1
InChIKey UUWCFFNWSJLLOZ-PQJNUFBGSA-N
Formula C25H34O10
HBA 10
HBD 1
MW 494.54
Rotatable Bonds 5
TPSA 133.42
LogP 2.64
Number Rings 4
Number Aromatic Rings 0
Heavy Atom Count 35
Formal Charge 0
Fraction CSP3 0.72
Exact Mass 494.22
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Daucus virgatus Umbelliferae Plantae 1869349

Showing of synonyms

  • Sirignano C, Snene A, et al. (2019). Daucovirgolides I-L, four congeners of the antimalarial daucovirgolide G from Daucus virgatus. Fitoterapia,2019,137,104188. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CC1C(=O)OC2C(CC(=O)O3)C3CC(=C)CCCC(O4)C24

Level: 1

Mol. Weight: 494.54 g/mol

Structure

SMILES: C12C(O2)CCCC(=C)CC3C(C1)CC(=O)O3

Level: 0

Mol. Weight: 494.54 g/mol

Structure

SMILES: C1CO1

Level: 0

Mol. Weight: 494.54 g/mol

Antimalarial

Absorption

Caco-2 (logPapp)
-4.98
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.63
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.43

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.39
Plasma Protein Binding
43.73
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
10.52
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.63
Biodegradation
Safe
Carcinogenesis
Toxic
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.48
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
6.33
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-314.26
Rat (Acute)
5.38
Rat (Chronic Oral)
1.83
Fathead Minnow
4.05
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Toxic
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
398.69
Hydration Free Energy
-2.79
Log(D) at pH=7.4
1.64
Log(P)
2.6
Log S
-3.62
Log(Vapor Pressure)
-7.92
Melting Point
94.07
pKa Acid
5.42
pKa Basic
-1.54
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.8646
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.8028
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.7521
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7518
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7356
Ferric enterobactin-binding periplasmic protein FepB P0AEL6 FEPB_ECOLI Escherichia coli 3 0.7262
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.7078
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 4 0.7059
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7009

Download SDF