15,16-epoxy- ent-cleroda-3,13(16),14-trien-12-oxo-18-oic acid methyl ester - Compound Card

15,16-epoxy- ent-cleroda-3,13(16),14-trien-12-oxo-18-oic acid methyl ester

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15,16-epoxy- ent-cleroda-3,13(16),14-trien-12-oxo-18-oic acid methyl ester

Structure
Zoomed Structure
  • Family: Plantae - Euphorbiaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Ent-Clerodane Diterpenoid
Canonical Smiles O=C(c1ccoc1)C[C@@]1(C)[C@H](C)CC[C@@]2([C@@H]1CCC=C2C(=O)O)C
InChI InChI=1S/C20H26O4/c1-13-7-9-19(2)15(18(22)23)5-4-6-17(19)20(13,3)11-16(21)14-8-10-24-12-14/h5,8,10,12-13,17H,4,6-7,9,11H2,1-3H3,(H,22,23)/t13-,17+,19+,20+/m1/s1
InChIKey VXVZOLCENMIHPM-IKTSWFPUSA-N
Formula C20H26O4
HBA 3
HBD 1
MW 330.42
Rotatable Bonds 4
TPSA 67.51
LogP 4.72
Number Rings 3
Number Aromatic Rings 1
Heavy Atom Count 24
Formal Charge 0
Fraction CSP3 0.6
Exact Mass 330.18
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Croton dictyophlebodes Euphorbiaceae Plantae 100370

Showing of synonyms

  • Munissi JJE, Isyaka SM, et al. (2020). Ent-clerodane and ent-trachylobane diterpenoids from Croton dictyophlebodes. Phytochemistry, 2020, 179, 112487. [View]

No compound-protein relationship available.

Structure

SMILES: c1occc1C(=O)CC(CCC2)C(C23)CCC=C3

Level: 1

Mol. Weight: 330.42 g/mol

Structure

SMILES: C1=CCCC(C12)CCCC2

Level: 0

Mol. Weight: 330.42 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 330.42 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.67
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.76
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.11

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.97
Plasma Protein Binding
82.01
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
3.91
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.07
Biodegradation
Safe
Carcinogenesis
Toxic
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.23
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
2.7
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-1.21
Rat (Acute)
2.42
Rat (Chronic Oral)
2.19
Fathead Minnow
3.92
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
380.59
Hydration Free Energy
-5.86
Log(D) at pH=7.4
1.44
Log(P)
4.32
Log S
-4.6
Log(Vapor Pressure)
-8.06
Melting Point
155.26
pKa Acid
4.39
pKa Basic
6.65
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
ABC-type polar amino acid transport system, ATPase component Q8RCC2 Q8RCC2_CALS4 Caldanaerobacter subterraneus subsp. tengcongensis 3 0.9476
Succinate dehydrogenase flavoprotein subunit P0AC41 SDHA_ECOLI Escherichia coli 3 0.8782
Sterol 14alpha-demethylase P9WPP9 CP51_MYCTU Mycobacterium tuberculosis 3 0.8495
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Q33862 Q33862_ASCSU Ascaris suum 3 0.8252
Rhodopsin P02699 OPSD_BOVIN Bos taurus 3 0.8129
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.8027
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7963
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7830
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7828
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7775
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7752
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7740
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA P45523 FKBA_ECOLI Escherichia coli 4 0.7665
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7659
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7614
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7597
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7594
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7591
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.7562
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.7560
Prostaglandin F2a synthase Q8I6L9 Q8I6L9_TRYCR Trypanosoma cruzi 2 0.7554
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 3 0.7524
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 2 0.7466
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7444
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7436
Hydroxymethylglutaryl-CoA synthase Q9FD71 HMGCS_ENTFL Enterococcus faecalis 2 0.7409
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7371
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 3 0.7365
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7340
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7308
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7307
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7289
Chalcone synthase 2 P30074 CHS2_MEDSA Medicago sativa 2 0.7236
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 2 0.7196
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 2 0.7159
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7157
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7151
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 2 0.7133
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 2 0.7127
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 2 0.7112
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7107
L-lactate dehydrogenase A chain P04642 LDHA_RAT Rattus norvegicus 2 0.7097
D-alanyl-D-alanine carboxypeptidase P15555 DAC_STRSR Streptomyces sp 2 0.7065

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