Tegerrardin B - Compound Card

Tegerrardin B

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Tegerrardin B

Structure
Zoomed Structure
  • Family: Plantae - Rutaceae
  • Kingdom: Plantae
  • Class: Alkaloid
    • Subclass: Acridone Alkaloid
Canonical Smiles CC(=CCOc1cc(O)cc2c1c(=O)c1c(n2C)cccc1)C
InChI InChI=1S/C19H19NO3/c1-12(2)8-9-23-17-11-13(21)10-16-18(17)19(22)14-6-4-5-7-15(14)20(16)3/h4-8,10-11,21H,9H2,1-3H3
InChIKey PQSBFWPJCIZBKR-UHFFFAOYSA-N
Formula C19H19NO3
HBA 4
HBD 1
MW 309.37
Rotatable Bonds 3
TPSA 51.46
LogP 3.74
Number Rings 3
Number Aromatic Rings 3
Heavy Atom Count 23
Formal Charge 0
Fraction CSP3 0.21
Exact Mass 309.14
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Teclea gerrardii Rutaceae Plantae 1237830

Showing of synonyms

  • Waffo AF, Coombes PH, et al. (2007). Acridone and furoquinoline alkaloids from Teclea gerrardii(Rutaceae: Toddalioideae) of southern Africa. Phytochemistry, 2007, 68(5), 663–667. [View]
Pubchem: 16112783
Nmrshiftdb2: 20249135

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)[nH]c3c(c2=O)cccc3

Level: 0

Mol. Weight: 309.37 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.65
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.18
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.86

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.42
Plasma Protein Binding
63.42
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
1.29
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Safe
Bioconcentration Factor
1.66
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.18
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.6
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
3.7
Rat (Acute)
2.19
Rat (Chronic Oral)
2.07
Fathead Minnow
5.14
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
429.09
Hydration Free Energy
-10.61
Log(D) at pH=7.4
1.91
Log(P)
4.17
Log S
-4.82
Log(Vapor Pressure)
-7.56
Melting Point
186.8
pKa Acid
7.02
pKa Basic
6.96
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 4 0.9544
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 3 0.9534
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8991
Methionine aminopeptidase 2 P9WK19 MAP12_MYCTU Mycobacterium tuberculosis 3 0.8967
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8952
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.8835
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.8740
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.8734
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8587
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.8554
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8482
Casein kinase II subunit alpha' P19784 CSK22_HUMAN Homo sapiens 3 0.8224
Biflaviolin synthase CYP158A2 Q9FCA6 C1582_STRCO Streptomyces coelicolor / M145) 3 0.8221
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8218
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8153
Biflaviolin synthase CYP158A2 Q9FCA6 C1582_STRCO Streptomyces coelicolor / M145) 3 0.8109
Proto-oncogene tyrosine-protein kinase Src P12931 SRC_HUMAN Homo sapiens 3 0.8081
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.8069
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 3 0.8018
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 4 0.7997
Fatty acid-binding protein, intestinal P12104 FABPI_HUMAN Homo sapiens 3 0.7991
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7907
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 2 0.7894
Enoyl-[acyl-carrier-protein] reductase [NADH] P9WGR1 INHA_MYCTU Mycobacterium tuberculosis 3 0.7876
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7862
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7852
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 2 0.7830
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7816
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 3 0.7816
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7813
Putative protease I Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron 2 0.7752
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7725
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7717
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7703
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 2 0.7693
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 4 0.7663
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7634
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7625
Prostaglandin reductase 2 Q8N8N7 PTGR2_HUMAN Homo sapiens 3 0.7599
Dipeptidyl peptidase 4 P27487 DPP4_HUMAN Homo sapiens 3 0.7576
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7567
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7553
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7553
Polymerase acidic protein Q5EP34 Q5EP34_9INFA Influenza A virus 2 0.7550
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.7544
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 2 0.7542
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7467
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.7446
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7437
Protocatechuate 3,4-dioxygenase beta chain P00437 PCXB_PSEPU Pseudomonas putida 2 0.7437
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 2 0.7422
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 2 0.7416
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7403
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 3 0.7366
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7366
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 2 0.7354
Glycylpeptide N-tetradecanoyltransferase Q4Q5S8 Q4Q5S8_LEIMA Leishmania major 3 0.7345
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7321
Thymidylate synthase P0A886 TYSY_ECO57 Escherichia coli O157:H7 2 0.7310
Angiotensin-converting enzyme 2 Q9BYF1 ACE2_HUMAN Homo sapiens 2 0.7303
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7299
4-hydroxyphenylacetate 3-monooxygenase Q8YHT7 Q8YHT7_BRUME Brucella melitensis biotype 1 2 0.7280
Protocatechuate 3,4-dioxygenase beta chain P00437 PCXB_PSEPU Pseudomonas putida 3 0.7279
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7273
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7273
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7265
Biflaviolin synthase CYP158A1 Q9KZF5 C1581_STRCO Streptomyces coelicolor / M145) 3 0.7254
4-chlorobenzoyl CoA ligase Q8GN86 Q8GN86_9BURK Alcaligenes sp. AL3007 3 0.7226
Serine/threonine-protein kinase Chk2 O96017 CHK2_HUMAN Homo sapiens 3 0.7207
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7202
Proto-oncogene tyrosine-protein kinase Src P12931 SRC_HUMAN Homo sapiens 3 0.7201
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7188
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 2 0.7186
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7161
Vanillate porin OpdK Q9HUR5 Q9HUR5_PSEAE Pseudomonas aeruginosa 2 0.7153
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 2 0.7148
Protocatechuate 3,4-dioxygenase beta chain P00437 PCXB_PSEPU Pseudomonas putida 2 0.7141
L-lactate dehydrogenase Q27743 LDH_PLAFD Plasmodium falciparum 2 0.7123
Genome polyprotein O92972 POLG_HCVJ4 Hepatitis C virus genotype 1b 3 0.7122
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7118
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 4 0.7117
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 2 0.7105
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7062
Carbonyl reductase [NADPH] 1 P16152 CBR1_HUMAN Homo sapiens 2 0.7042
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7029
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 2 0.7011
Cyclic nucleotide-binding protein B8FW11 B8FW11_DESHD Desulfitobacterium hafniense 3 0.7004

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