COMPLEXES



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70 Complexe(s)
1
PDB: 1G7V
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Escherichia coli (strain K12)

Uniprot: P0A715 · KDSA_ECOLI

Gene ID: kdsA

Ligand
COVPDB2CYS5041

{[(2,2-DIHYDROXY-ETHYL)-(2,3,4,5-T…

Ligand ID: COVPDB2CYS5041

HET: PAI

2
PDB: 1JCX
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Aquifex aeolicus (strain VF5)

Uniprot: O66496 · KDSA_AQUAE

Gene ID: kdsA

Ligand
COVPDB2CYS5041

{[(2,2-DIHYDROXY-ETHYL)-(2,3,4,5-T…

Ligand ID: COVPDB2CYS5041

HET: PAI

3
PDB: 1LRQ
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Aquifex aeolicus (strain VF5)

Uniprot: O66496 · KDSA_AQUAE

Gene ID: kdsA

Ligand
COVPDB2CYS2103

ARABINOSE-5-PHOSPHATE

Ligand ID: COVPDB2CYS2103

HET: A5P

4
PDB: 1PCK
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Aquifex aeolicus (strain VF5)

Uniprot: O66496 · KDSA_AQUAE

Gene ID: kdsA

Ligand
COVPDB2CYS5049

2-(PHOSPHONOOXY)BUTANOIC ACID

Ligand ID: COVPDB2CYS5049

HET: PEZ

5
PDB: 1PCW
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Aquifex aeolicus (strain VF5)

Uniprot: O66496 · KDSA_AQUAE

Gene ID: kdsA

Ligand
COVPDB2CYS3450

1-DEOXY-6-O-PHOSPHONO-1-[(PHOSPHON…

Ligand ID: COVPDB2CYS3450

HET: H4P

6
PDB: 1QS0
TYPE OF BINDING
Covalently Bound
Protein

2-oxoisovalerate dehydrogenase sub…

Pseudomonas putida (Arthrobacter s…

Uniprot: P09061 · ODBB_PSEPU

Gene ID: bkdA2

Ligand
COVPDB2OR3044

Unknown Ligand Name

Ligand ID: COVPDB2OR3044

HET: COI

7
PDB: 1W3I
TYPE OF BINDING
Covalently Bound
Protein

2-dehydro-3-deoxy-phosphogluconate…

Saccharolobus solfataricus (Sulfol…

Uniprot: O54288 · KDGA_SACSO
Ligand
COVPDB2V2378

PYRUVATE

Ligand ID: COVPDB2V2378

HET: PYR

8
PDB: 1W3N
TYPE OF BINDING
Covalently Bound
Protein

2-dehydro-3-deoxy-phosphogluconate…

Saccharolobus solfataricus (Sulfol…

Uniprot: O54288 · KDGA_SACSO
Ligand
COVPDB1326

D-KDG

Ligand ID: COVPDB1326

HET: SSH

9
PDB: 1W3T
TYPE OF BINDING
Covalently Bound
Protein

2-dehydro-3-deoxy-phosphogluconate…

Saccharolobus solfataricus (Sulfol…

Uniprot: O54288 · KDGA_SACSO
Ligand
COVPDB1289

2‐keto‐3‐deoxy galactonate

Ligand ID: COVPDB1289

HET: RSH

10
PDB: 1ZJI
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Aquifex aeolicus (strain VF5)

Uniprot: O66496 · KDSA_AQUAE

Gene ID: kdsA

Ligand
COVPDB2CYS0474

2-PHOSPHOGLYCERIC ACID

Ligand ID: COVPDB2CYS0474

HET: 2PG

11
PDB: 2LXY
TYPE OF BINDING
Covalently Bound
Protein

2-mercaptophenol-alpha3C

None

Ligand
COVPDB920

2-mercaptophenol

Ligand ID: COVPDB920

HET: HTS

12
PDB: 2O73
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-oxo-4-hydroxy-4-carboxy-5-ureido…

Danio rerio (Zebrafish) (Brachydan…

Uniprot: A1L259 · URAD_DANRE

Gene ID: urad

Ligand
COVPDB2CYS0415

1-(2,5-DIOXO-2,5-DIHYDRO-1H-IMIDAZ…

Ligand ID: COVPDB2CYS0415

HET: 2AL

13
PDB: 2PW0
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-methyl-aconitate isomerase

Shewanella oneidensis (strain ATCC…

Uniprot: Q8EJW4 · PRPF_SHEON

Gene ID: prpF

Ligand
COVPDB2CYS5964

TRICARBALLYLIC ACID

Ligand ID: COVPDB2CYS5964

HET: TRC

14
PDB: 2V82
TYPE OF BINDING
Covalently Bound
Protein

2-dehydro-3-deoxy-6-phosphogalacto…

Escherichia coli (strain K12)

Uniprot: Q6BF16 · DGOA_ECOLI

Gene ID: dgoA

Ligand
COVPDB1029

2-KETO-DEOXY-GALACTOSE

Ligand ID: COVPDB1029

HET: KDP

15
PDB: 3E12
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Aquifex aeolicus (strain VF5)

Uniprot: O66496 · KDSA_AQUAE

Gene ID: kdsA

Ligand
COVPDB2CYS4038

3-deoxy-8-O-phosphono-D-manno-oct-…

Ligand ID: COVPDB2CYS4038

HET: KD0

16
PDB: 3Q6J
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-oxopropyl-CoM reductase, carboxy…

Xanthobacter versatilis

Uniprot: Q56839 · XECC_XANVE

Gene ID: xecC

Ligand
COVPDB2CYS2566

1-THIOETHANESULFONIC ACID

Ligand ID: COVPDB2CYS2566

HET: COM

17
PDB: 3Q6J
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-oxopropyl-CoM reductase, carboxy…

Xanthobacter versatilis

Uniprot: Q56839 · XECC_XANVE

Gene ID: xecC

Ligand
COVPDB2CYS4108

(2-[2-KETOPROPYLTHIO]ETHANESULFONA…

Ligand ID: COVPDB2CYS4108

HET: KPC

18
PDB: 3TMQ
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Burkholderia pseudomallei (strain …

Uniprot: Q3JP68 · Q3JP68_BURP1

Gene ID: kdsA

Ligand
COVPDB2CYS2103

ARABINOSE-5-PHOSPHATE

Ligand ID: COVPDB2CYS2103

HET: A5P

19
PDB: 3UND
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-dehydro-3-deoxyphosphooctonate a…

Burkholderia pseudomallei (strain …

Uniprot: Q3JP68 · Q3JP68_BURP1

Gene ID: kdsA

Ligand
COVPDB2CYS4038

3-deoxy-8-O-phosphono-D-manno-oct-…

Ligand ID: COVPDB2CYS4038

HET: KD0

20
PDB: 4I25
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-aminomuconate 6-semialdehyde deh…

Pseudomonas fluorescens

Uniprot: Q83V33 · Q83V33_PSEFL

Gene ID: nbaE

Ligand
COVPDB2CYS1342

(2E,4E)-2-amino-6-oxohexa-2,4-dien…

Ligand ID: COVPDB2CYS1342

HET: 6OD

21
PDB: 4LA6
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-methylisoborneol synthase

Streptomyces coelicolor (strain AT…

Uniprot: Q9F1Y6 · MIBS_STRCO

Gene ID: SCO7700

Ligand
COVPDB2CYS4250

(2E)-2-fluoro-3,7-dimethylocta-2,6…

Ligand ID: COVPDB2CYS4250

HET: LA6

22
PDB: 4NPI
TYPE OF BINDING
Covalently Bound
Protein

2-aminomuconate 6-semialdehyde deh…

Pseudomonas fluorescens

Uniprot: Q83V33 · Q83V33_PSEFL

Gene ID: nbaE

Ligand
COVPDB162

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-di…

Ligand ID: COVPDB162

HET: 2VS

23
PDB: 4OU2
TYPE OF BINDING
Covalently Bound
Protein

2-aminomuconate 6-semialdehyde deh…

Pseudomonas fluorescens

Uniprot: Q83V33 · Q83V33_PSEFL

Gene ID: nbaE

Ligand
COVPDB162

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-di…

Ligand ID: COVPDB162

HET: 6OA

24
PDB: 4OUB
TYPE OF BINDING
Covalently Bound
Protein

2-aminomuconate 6-semialdehyde deh…

Pseudomonas fluorescens

Uniprot: Q83V33 · Q83V33_PSEFL

Gene ID: nbaE

Ligand
COVPDB162

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-di…

Ligand ID: COVPDB162

HET: 2VS

25
PDB: 5B48
TYPE OF BINDING
Non-Covalently Bound
Near To Cysteines
Protein

2-oxoacid:ferredoxin oxidoreductas…

Sulfurisphaera tokodaii (strain DS…

Uniprot: Q96Y68 · OFOB1_SULTO

Gene ID: ST2298

Ligand
COVPDB2CYS5883

2-[(2E)-3-[(4-azanyl-2-methyl-pyri…

Ligand ID: COVPDB2CYS5883

HET: TDN